PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G191300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 123aa    MW: 13938.2 Da    PI: 9.2801
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G191300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.61.6e-06791032755
                        SCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  27 lPkaskapskKlsKaeiLekAveYIksLq 55 
                        +P+     +k  + a++L +AveYIk+Lq
  Aqcoe7G191300.1.p  79 VPN----MDKQTNTADMLDLAVEYIKELQ 103
                        344....4678*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.13E-868109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-577107No hitNo description
Gene3DG3DSA:4.10.280.103.1E-878107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MPCFNLTFQS NEQNPEAGNQ TRNLTHHFSL PKTSVEMAAI LEFQDSVPCK IRAKRGCATH  60
PRSIAERVTT IYILMLALVP NMDKQTNTAD MLDLAVEYIK ELQKQVKYST VWRGRTLLRI  120
TV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928471.12e-41PREDICTED: transcription factor bHLH130-like
SwissprotQ66GR34e-37BH130_ARATH; Transcription factor bHLH130
TrEMBLA0A067GXE53e-41A0A067GXE5_CITSI; Uncharacterized protein (Fragment)
TrEMBLB9II303e-41B9II30_POPTR; Uncharacterized protein
TrEMBLA0A059DI713e-41A0A059DI71_EUCGR; Uncharacterized protein
STRINGPOPTR_0016s05100.19e-41(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-38bHLH family protein